Most of the resources below and much more are accessible at Mimubase, a centralized resource and information port for Mimulus research.
Genomes
Mimulus lewisii LF10 Genome v1.1: This is the draft LF10 genome assembly generated in the study “Genetic dissection of a major anthocyanin QTL contributing to pollinator-mediated reproductive isolation between sister species of Mimulus” (Yuan et al. 2013. Genetics. 194: 255-263).
Mimulus lewisii LF10 Genome v1.8: This is a much improved LF10 genome assembly generated in the Fall of 2015, containing ~5000 scaffolds with N50 of 180 Kb and was first used in the study “Molecular basis of overdominance at a flower color locus” (LaFountain et al., 2017. G3. 7: 3947-3954).
Mimulus lewisii LF10 Genome v2.0: This is a chromosomal level assembly generated by 75x PacBio data and high-resolution intra-specific linkage map.
Mimulus lewisii SL9 Genome v1.0: This is the draft genome assembly of the SL9 mapping line, generated in the study “Bulk segregant analysis of an induced floral mutant identifies a MIXTA-like R2R3 MYB controlling nectar guide formation in Mimulus lewisii” (Yuan et al. 2013. Genetics. 194: 523-528).
Mimulus lewisii SL9 pseudoscaffolds: This is the pseudoscaffolds of SL9 generated by aligning the individual SL9 contigs to the M. guttatus chromosomes, used in the “Bulk segregant analysis of an induced floral mutant identifies a MIXTA-like R2R3 MYB controlling nectar guide formation in Mimulus lewisii” (Yuan et al. 2013. Genetics. 194: 523-528).
Mimulus cardinalis CE10 Genome v1.1: This is the draft CE10 genome assembly generated in the study “Genetic dissection of a major anthocyanin QTL contributing to pollinator-mediated reproductive isolation between sister species of Mimulus” (Yuan et al. 2013. Genetics. 194: 255-263).
Mimulus cardinalis CE10 Genome v2.0: This is a chromosomal level assembly generated by 60x PacBio data and high-resolution intra-specific linkage map.
Mimulus verbenaceus MvBL Genome v1.1: This is the MvBL genome assembly generated using 60x Pac-Bio data, with a contig N50 of 1.1 Mb.
Mimulus parishii Mpar Genome v1.1: This is the Mpar genome assembly generated using 60x Pac-Bio data, with a contig N50 of 2.0 Mb.
Transcriptomes
Mimulus lewisii LF10 Transcriptome v1.1: This is the LF10 15-mm corolla transcriptome generated in the study “Transcriptonal control of florla anthocyanin pigmentation in monkeyflowers (Mimulus)” (Yuan et al. 2014. New Phytologist. 204: 1013–1027).
Mimulus lewisii LF10 Transcriptome v1.2: This is an updated transcriptome generated from LF10 leaf tissue and several flower developmental stages (including the calyx, corolla, stamens, and pistil).
Mimulus verbenaceus MvBL Transcriptome v1.0: This is a transcriptome generated from MvBL leaf tissue and several flower developmental stages (including the calyx, corolla, stamens, and pistil).
TE libraries
Mimulus guttatus TE exemplar library.